ailist.AIList.from_array

AIList.from_array(self, const long[::1] starts, const long[::1] ends, const long[::1] ids)

Add intervals from arrays to AIList inplace

Parameters:

starts : ndarray{long}

Start positions of intervals

ends : numpy.ndarray{long}

End positions of intervals

ids : numpy.ndarray{long}

ID of intervals

Returns:

None

See also

AIList.add

Add interval to AIList

AIList.construct

Construct AIList, required to call AIList.intersect

AIList.intersect

Find intervals overlapping given range

Examples

>>> from ailist import AIList
>>> import numpy as np
>>> starts = np.arange(100)
>>> ends = starts + 10
>>> index = np.arange(len(starts))
>>> ail = AIList()
>>> ail.from_array(starts, ends, index)
>>> ail.
AIList
  range: (0-109)
   (0-10, 0)
   (1-11, 1)
   (2-12, 2)
   (3-13, 3)
   (4-14, 4)
   ...
   (95-105, 95)
   (96-106, 96)
   (97-107, 97)
   (98-108, 98)