intervalframe.IntervalFrame.bin_coverage

IntervalFrame.bin_coverage(bin_size=100000, min_length=None, max_length=None)

Find sum of coverage within binned positions

Parameters:

bin_size : int

Size of the bin to use

min_length : int

Minimum length of intervals to include [default = None]

max_length : int

Maximum length of intervals to include [default = None]

Returns:

cov_iframeIntervalFrame

Positions of coverage values